CellCelector Nanowell Arrays

Nanowell arrays for single cell isolation, screening and cloning

We have developed a wide range of innovative CellCelector nanowell arrays for single-cell screening and isolation as well as single cell cloning workflows to be used in various clinical, research and bioprocessing applications.

When used with the CellCelector single cell and clone picking system, nanowell consumables are easy to use and enable high-throughput and cost-effective alternatives to conventional limiting dilution, FACS and other single cell screening and cloning methods. Our nanowell arrays are available in various formats from 2 well chamber slides to 6 and 24 well plates. They are featuring from 100,000 to several millions of nanowells per plate/slide at nanowell volumes from several nanoliter down to a few picoliter.

Single Cell Cloning (S200)

CellCelector 4 nl nanowell plates for single cell cloning (S200)

CellCelector nanowell plates feature thousands of 200 µm square shape nanowells (S200) allowing cloning of hundreds or thousands of clones in parallel inside the nanowells. The volume of each nanowell is 4 nl which is sufficiently large for a clone of 50-100 cells (depending on cell size). The plates are available in standard SBS 6 and 24 well formats which allow running multiple experiments side-by-side. 6 well and 24 well plates feature respectively 135,000 and 100,000 nanowells per plate. An Ultra-Low Attachment (ULA) surface prevents cells from adhering to the surface and therefore allows 3D spheroid formation and a 100 % efficient automated single cell or clone transfer from the nanowells to regular cell culture plates for expansion or analysis.

Overview of a scanned well and different zoom levels down to a single nanowell (10x). The CellCelector allows automated scanning and detection of nanowells and cells located inside the wells.

CellCelector S200 ULA nanowell plates are ideal for the following workflows:

  • High-throughput single cell cloning and screening (CHO, HEK, PER.C6 etc.)
  • Single cell cloning after gene editing (e.g. stem cells like iPSC etc.)
  • Isolation of sets of defined cell numbers (e.g. 1, 5, 20, 50, 100) for reference samples
  • Spheroid formation, imaging and screening

   
The 24 well plate offers a cost-efficient solution for processing multiple samples in parallel. Each well allows clonal growth of more than 500 single cells into clones.

Specifications

Product

Plate S200-100 72K, 24 well,
ULA

Catalog number

CC0079

Plate dimensions (mm)

128 x 86 x 22

Plate material

PS

Number of wells

24

Nanowell volume

4nl

Nanowell shape

Square

Nanowell size

200 x 200 µm

Nanowell depth

100 µm

Nanowells per well

3,000

Nanowells per plate

72,000

Nanowell surface treatment

ULA

Recommended glass capillary tip diameter

80 µm

S200 nanowell plates are available also with a plasma treated nanowell surface suited for adherent cell culturing (product numbers CC0075 for 24 well plates and CC0073 for 6 well plates, see ordering information below).

Single Cell Screening and Rare Single Cell lsolation (H100, U40, U25)

CellCelector sub-nanoliter nanowell arrays for single cell screening and rare single cell isolation (H100, U40, U25)

Arrays of sub-nanoliter nanowells provide a next generation system for screening and isolation of single cells. We have developed a range of nanowell arrays with nanowell sizes currently ranging from 100 µm (0.9 nl) to 25 µm (12 pl volume). 100 µm nanowells feature a hexagonal shape providing high packing efficiency of nanowells and easy picking. They can be also used for single cell cloning up to approximately 16 cells per clone. Smaller 40 µm nanowells allow for co-location of different cell types in the same wells for functional studies or receptor/reporter cell assays. Finally 25 µm and smaller nanowells provide the isolation and analysis of rare single cells like circulating tumor cells (CTCs)/fetal cells or the screening of antibody/protein producing cells (e.g. B-Cells) through secretion assays. Effectively separating single cells in small wells with a defined spacing allows extremely high seeding densities of tens of thousands of cells without compromising on the ability to screen, analyze or to pick them individually.  All small nanowells have an optimized and patent pending UFO design providing 100 % single cell recovery efficiency.

H100 hexagonal nanowell array with grown hybridoma clones
(0.9 nl/nanowell)

U25 UFO nanowell array loaded with circulating tumor cells
(12 pl/nanowell)

Sub-nanoliter nanowell arrays are offered in two standard formats: 6 well plate and 2 well chamber slide.

Nanowell 6 well plate

Nanowell 2 well slide

Specifications

Product

Plate H100-100 330K, 24 well

Plate H100-100 360K, 6 well

Plate U40-40 850K, 24 well

Plate U40-40 1M, 6 well

Slide U40-40 200K, 2 well

SlideU25-25 400K, 2 well

Catalog number

CC0084

CC0080

CC0096

CC0097

CC0083

CC0081

Dimensions (mm)

128 x 86 x 22

128 x 86 x 22

128 x 86 x 22

128 x 86 x 22

25.5 x 75.5 x 10.8

25.5 x 75.5 x 10.8

Number of wells

24

6

24

6

2

2

Nanowell volume

0.9 nl

0.9 nl

50 pl

50 pl

50 pl

21 pl

Nanowell shape

Hex

Hex

UFO (winged circle)

UFO (winged circle)

UFO (winged circle)

UFO (winged circle)

Nanowell size

100 µm

100 µm

40 µm

40 µm

40 µm

25 µm

Nanowell depth

100 µm

100 µm

40 µm

40 µm

40 µm

25 µm

Nanowells per well

14,000

60,000

36,000

160,000

50,000

200,000

Nanowells per plate / slide

330,000

360,000

850,000

1,000,000

200,000

400,000

Nanowell surface

Non-treated

Non-treated

Non-treated

Non-treated

Non-treated

Non-treated

Recommended glass capillary tip diameter

50 µm

50 µm

30 µm

30 µm

30 µm

20 µm



CellCelector sub-nanoliter arrays are ideal for the following workflows:

  • B-cell screening through secretion assays in the nanowells for Antibody Discovery
  • Hybridoma single cell cloning and screening
  • Functional assays studying cell-to-cell interaction (e.g. T-Cells etc.)
  • Rare cell isolation (CTCs, fetal cells, etc.)
  • Cluster isolation

Rare Single Cell Isolation Workflows

SIEVEWELL nanowell arrays for rare single cell isolation workflows

The SIEVEWELL chip consists of a thin membrane with nanowells of 20 µm in size and 25 µm in height each. In total there are 370,000 wells on the chip on an area of 17 x 17 mm. The outer dimensions of the chip correspond to the standard microscope slide format. Within each nanowell there are 2 pores with a diameter of 2 µm. The hexagonal shape of the wells is ideal for automated cell detection and cell counting. The membrane is characterized by a very high transparency as well as very low autofluorescence and is therefore ideally suited for microscopic and optical measurements.

Sievewell chip

Microscopic view of nanowell structure with 2 pores in each well

Specifications

Product

SIEVEWELL Slide 370K

SIEVEWELL Slide 90K

Catalog number

CC0085

CC0098

Dimensions (mm)

25 x 75 x 12

25 x 75 x 12

Working volume (ml)

0.5 - 2

0.5 - 2

Number of wells per slide

1

1

Nanowell volume

8.6 pl

108 pl

Nanowell shape

Hex

Hex

Nanowell size

20 µm

50 µm

Nanowell depth

25 µm

50 µm

Nanowells per slide

370,000

90,000

Nanowell surface

Non-treated

Non-treated

Recommended glass capillary tip diameter

20 µm

20 µm


 

Due to its unique sieve structure SIEVEWELL arrays are a simple and perfect solution for

  • On-chip staining of rare single cells, like circulating tumor cells, fetal cells etc. without any cell loss
  • Single cell capture from cell suspensions: just pipetting. No pumps are needed.

Ordering Information

Nanowell design S200, 4 nl/nanowell

Catalog No.

Format

Description

Qty/pack

CC0079

24

CellCelector Nanowell plate S200-100 100K, 24 well, ULA

5

CC0075

24

CellCelector Nanowell plate S200-100 100K, 24 well, Plasma treated

5


Nanowell design H100, 0.8 nl/nanowell

Catalog No.

Format

Description

Qty/pack

CC0084

24

CellCelector Nanowell plate H100-100 330K, 24 well, Non-treated

5

CC0080

6

CellCelector Nanowell plate H100-100 360K, 6 well, Non-treated

5


Nanowell design U40, 50 pl/nanowell

Catalog No.

Format

Description

Qty/pack

CC0096

24

CellCelector Nanowell plate U40-40 850K, 24 well, Non-treated

5

CC0097

6

CellCelector Nanowell plate U40-40 1M, 6 well, Non-treated

5

CC0083

***


CellCelector Nanowell slide U40-40 200K, 2 well, Non-treated

5


Nanowell design U25, 12 pl/nanowell

Catalog No.

Format

Description

Qty/pack

CC0081

***

CellCelector Nanowell slide U25-25 400K, 2 well, Non-treated

5


Nanowell design U15, 2.7 pl/nanowell

Catalog No.

Format

Description

Qty/pack

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SIEVEWELL Slide

Catalog No.

Format

Description

Qty/pack

CC0085

***

SIEVEWELL slide, 370K, 1 well, Non-treated

5

CC0098

***

SIEVEWELL slide, 90K, 1 well, Non-treated

5


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